The Agency is managed by a Managing Board consisting of a president and six members.
The president and five members of the Managing Board are appointed and dismissed by the Government of the Republic of Croatia, as follows:
- the president and three members at the proposal of the Minister responsible for education (hereinafter: the Minister) and
- two members, one of whom is a representative of the trade union, and the other representative of the employers, at the proposal of the Economic and Social Council.
One member of the Managing Board is appointed and dismissed by the Agency from among its employees.
The term of office of the members of the Managing Board is four years from the day of its constitution, with the right of reappointment.